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1

Taxonomic Studies of Predatory Bdellovibrios Based on 16S rRNA Analysis, Ribotyping and the hit Locus and Characterization of Isolates from the Gut of Animals

Dominik Schwudke, Eckhard Strauch, Monika Krueger, Bernd Appel

Journal:

Systematic and Applied Microbiology

Année:

2001

Langue:

english

Fichier:

PDF, 1.05 MB

english, 2001

2

Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans

Sider Penkov, Fanny Mende, Vyacheslav Zagoriy, Cihan Erkut, Dr. René Martin, Ulrike Pässler, Kai Schuhmann, Dr. Dominik Schwudke, Dr. Margit Gruner, Jana Mäntler, Dr. Thomas Reichert-Müller, Dr. Andre

Journal:

Angewandte Chemie

Année:

2010

Langue:

english

Fichier:

PDF, 905 KB

english, 2010

3

Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans

Sider Penkov, Fanny Mende, Vyacheslav Zagoriy, Cihan Erkut, Dr. René Martin, Ulrike Pässler, Kai Schuhmann, Dr. Dominik Schwudke, Dr. Margit Gruner, Jana Mäntler, Dr. Thomas Reichert-Müller, Dr. Andre

Journal:

Angewandte Chemie International Edition

Année:

2010

Langue:

english

Fichier:

PDF, 940 KB

english, 2010

4

Requirement of branched chain and long chain fatty acids in C. elegans

Teymuras V. Kurzchalia, Eugeni V. Entchev, Dominik Schwudke, Vyacheslav Zagoriy, Vitali Matyash, Aliona Bogdanova, Bianca Habermann, Lin Zhu, Andrej Shevchenko

Journal:

Chemistry and Physics of Lipids

Année:

2009

Langue:

english

Fichier:

PDF, 59 KB

english, 2009

5

Sphingolipid metabolism in Drosophila neurodegeneration: Roles of ceramide and cholesterol storage

Rachel Kraut, Sarita Hebbar, Kathleen Osborne, Ishtapran Sahoo, George Boo, Dominik Schwudke

Journal:

Chemistry and Physics of Lipids

Année:

2011

Langue:

english

Fichier:

PDF, 56 KB

english, 2011

6

Transcriptional Activity of the Host-Interaction Locus and a Putative Pilin Gene ofBdellovibrio bacteriovorusin the Predatory Life Cycle

Dominik Schwudke, Anne Bernhardt, Sebastian Beck, Kazimierz Madela, Michael W. Linscheid, Bernd Appel, Eckhard Strauch

Journal:

Current Microbiology

Année:

2005

Langue:

english

Fichier:

PDF, 260 KB

english, 2005

7

Characterization of outer membrane protein fractions of Bdellovibrionales

Sebastian Beck, Dominik Schwudke, Bernd Appel, Michael Linscheid, Eckhard Strauch

Journal:

FEMS Microbiology Letters

Année:

2005

Langue:

english

Fichier:

PDF, 382 KB

english, 2005

8

Lipidome of narrow-band ultraviolet B irradiated keratinocytes shows apoptotic hallmarks

Adam Reich, Dominik Schwudke, Michael Meurer, Bodo Lehmann, Andrej Shevchenko

Journal:

Experimental Dermatology

Année:

2010

Langue:

english

Fichier:

PDF, 667 KB

english, 2010

9

Glycosphingolipid Requirements for Endosome-to-Golgi Transport of Shiga Toxin

Hilde Raa, Stine Grimmer, Dominik Schwudke, Jonas Bergan, Sébastien Wälchli, Tore Skotland, Andrej Shevchenko, Kirsten Sandvig

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 1.33 MB

english, 2009

10

Bottom-Up Shotgun Lipidomics by Higher Energy Collisional Dissociation on LTQ Orbitrap Mass Spectrometers

Schuhmann, Kai, Herzog, Ronny, Schwudke, Dominik, Metelmann-Strupat, Wolfgang, Bornstein, Stefan R., Shevchenko, Andrej

Journal:

Analytical Chemistry

Année:

2011

Langue:

english

Fichier:

PDF, 1009 KB

english, 2011

11

Top-Down Lipidomic Screens by Multivariate Analysis of High-Resolution Survey Mass Spectra

Schwudke, Dominik, Hannich, J. Thomas, Surendranath, Vineeth, Grimard, Vinciane, Moehring, Thomas, Burton, Lyle, Kurzchalia, Teymuras, Shevchenko, Andrej

Journal:

Analytical Chemistry

Année:

2007

Langue:

english

Fichier:

PDF, 433 KB

english, 2007

12

[Methods in Enzymology] Lipidomics and Bioactive Lipids: Specialized Analytical Methods and Lipids in Disease Volume 433 || Shotgun Lipidomics by Tandem Mass Spectrometry under Data‐Dependent Acquisition Control

Schwudke, Dominik

Année:

2007

Langue:

english

Fichier:

PDF, 314 KB

english, 2007

13

The Interaction of Prussian Blue and Dissolved Hexacyanoferrate Ions with Goethite (α-FeOOH) Studied to Assess the Chemical Stability and Physical Mobility of Prussian Blue in Soils

Fritz Scholz, Dominik Schwudke, Reinhard Stösser, Jaroslav Boháček

Journal:

Ecotoxicology and Environmental Safety

Année:

2001

Langue:

english

Fichier:

PDF, 427 KB

english, 2001

14

Lipid Profiling by Multiple Precursor and Neutral Loss Scanning Driven by the Data-Dependent Acquisition

Schwudke, Dominik, Oegema, Jeffrey, Burton, Lyle, Entchev, Eugeni, Hannich, J. Thomas, Ejsing, Christer S., Kurzchalia, Teymuras, Shevchenko, Andrej

Journal:

Analytical Chemistry

Année:

2006

Langue:

english

Fichier:

PDF, 396 KB

english, 2006

15

Constitutive Formation of Caveolae in a Bacterium

Walser, Piers J., Ariotti, Nicholas, Howes, Mark, Ferguson, Charles, Webb, Richard, Schwudke, Dominik, Leneva, Natalya, Cho, Kwang-Jin, Cooper, Leanne, Rae, James, Floetenmeyer, Matthias, Oorschot, Vi

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 5.80 MB

english, 2012

16

Predatory mechanisms of Bdellovibrio and like organisms

Strauch, Eckhard, Schwudke, Dominik, Linscheid, Michael

Journal:

Future Microbiology

Année:

2007

Langue:

english

Fichier:

PDF, 655 KB

english, 2007

17

A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language

Ronny Herzog, Dominik Schwudke, Kai Schuhmann, Julio L Sampaio…

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2011

18

Laser Capture Microdissection Coupled with On-Column Extraction LC-MS n Enables Lipidomics of Fluorescently Labeled Drosophila Neurons

Hebbar, Sarita, Schulz, Wolf Dieter, Sauer, Ulrich, Schwudke, Dominik

Journal:

Analytical Chemistry

Année:

2014

Langue:

english

Fichier:

PDF, 5.42 MB

english, 2014

19

Total Synthesis of Five Lipoteichoic acids of Clostridium difficile

Hogendorf, Wouter F. J., Gisch, Nicolas, Schwudke, Dominik, Heine, Holger, Bols, Mikael, Pedersen, Christian Marcus

Journal:

Chemistry - A European Journal

Année:

2014

Langue:

english

Fichier:

PDF, 741 KB

english, 2014

20

Central Leptin Regulates Total Ceramide Content and Sterol Regulatory Element Binding Protein-1C Proteolytic Maturation in Rat White Adipose Tissue

Bonzón-Kulichenko, Elena, Schwudke, Dominik, Gallardo, Nilda, Moltó, Eduardo, Fernández-Agulló, Teresa, Shevchenko, Andrej, Andrés, Antonio

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 336 KB

english, 2009

21

Structure of the pneumococcal l , d -carboxypeptidase DacB and pathophysiological effects of disabled cell wall hydrolases DacA and DacB

Abdullah, Mohammed R., Gutiérrez-Fernández, Javier, Pribyl, Thomas, Gisch, Nicolas, Saleh, Malek, Rohde, Manfred, Petruschka, Lothar, Burchhardt, Gerhard, Schwudke, Dominik, Hermoso, Juan A., Hammersc

Journal:

Molecular Microbiology

Année:

2014

Langue:

english

Fichier:

PDF, 18.37 MB

english, 2014

22

Phosphatidylinositol 4-phosphate and phosphatidylinositol 3-phosphate regulate phagolysosome biogenesis

Jeschke, Andreas, Zehethofer, Nicole, Lindner, Buko, Krupp, Jessica, Schwudke, Dominik, Haneburger, Ina, Jovic, Marko, Backer, Jonathan M., Balla, Tamas, Hilbi, Hubert, Haas, Albert

Journal:

Proceedings of the National Academy of Sciences

Année:

2015

Langue:

english

Fichier:

PDF, 1.18 MB

english, 2015

23

Lipid Analysis of Airway Epithelial Cells for Studying Respiratory Diseases

Zehethofer, Nicole, Bermbach, Saskia, Hagner, Stefanie, Garn, Holger, Müller, Julia, Goldmann, Torsten, Lindner, Buko, Schwudke, Dominik, König, Peter

Journal:

Chromatographia

Année:

2015

Langue:

english

Fichier:

PDF, 2.32 MB

english, 2015

24

Structure of Sterol Aliphatic Chains Affects Yeast Cell Shape and Cell Fusion during Mating

Pablo S. Aguilar, Maxwell G. Heiman, Tobias C. Walther, Alex Engel, Dominik Schwudke, Nathan Gushwa, Teymuras Kurzchalia and Peter Walter

Journal:

Proceedings of the National Academy of Sciences

Année:

2010

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2010

25

Isoniazid@Fe 2 O 3 -Nanocontainer mit antibakterieller Wirkung auf Tuberkulose-Mykobakterien

Leidinger, Peter, Treptow, Jens, Hagens, Kristine, Eich, Jacqueline, Zehethofer, Nicole, Schwudke, Dominik, Oehlmann, Wulf, Lünsdorf, Heinrich, Goldmann, Oliver, Schaible, Ulrich E., Dittmar, Kurt E.

Journal:

Angewandte Chemie

Année:

2015

Langue:

german

Fichier:

PDF, 5.20 MB

german, 2015

26

Isoniazid@Fe 2 O 3 Nanocontainers and Their Antibacterial Effect on Tuberculosis Mycobacteria

Leidinger, Peter, Treptow, Jens, Hagens, Kristine, Eich, Jacqueline, Zehethofer, Nicole, Schwudke, Dominik, Oehlmann, Wulf, Lünsdorf, Heinrich, Goldmann, Oliver, Schaible, Ulrich E., Dittmar, Kurt E.

Journal:

Angewandte Chemie International Edition

Année:

2015

Langue:

english

Fichier:

PDF, 5.15 MB

english, 2015

27

A saposin deficiency model in Drosophila: Lysosomal storage, progressive neurodegeneration and sensory physiological decline

Hindle, Samantha J., Hebbar, Sarita, Schwudke, Dominik, Elliott, Christopher J., Sweeney, Sean T.

Journal:

Neurobiology of Disease

Année:

2016

Langue:

english

Fichier:

PDF, 994 KB

english, 2016

28

Unusual Lipid A from a cold adapted bacterium: detailed structural characterization

Corsaro, Maria Michela, Casillo, Angela, Ziaco, Marcello, Lindner, Buko, Parrilli, Ermenegilda, Schwudke, Dominik, Holgado, Aurora, Verstrepen, Lynn, Sannino, Filomena, Beyaert, Rudi, Lanzetta, Rosa,

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2017

29

Lipoteichoic acid of Streptococcus oralis Uo5: a novel biochemical structure comprising an unusual phosphorylcholine substitution pattern compared to Streptococcus pneumoniae

Gisch, Nicolas, Schwudke, Dominik, Thomsen, Simone, Heß, Nathalie, Hakenbeck, Regine, Denapaite, Dalia

Journal:

Scientific Reports

Année:

2015

Langue:

english

Fichier:

PDF, 1.72 MB

english, 2015

30

Erratum: Corrigendum: Lipoteichoic acid of Streptococcus oralis Uo5: a novel biochemical structure comprising an unusual phosphorylcholine substitution pattern compared to Streptococcus pneumoniae

Gisch, Nicolas, Schwudke, Dominik, Thomsen, Simone, Heß, Nathalie, Hakenbeck, Regine, Denapaite, Dalia

Journal:

Scientific Reports

Année:

2016

Langue:

english

Fichier:

PDF, 129 KB

english, 2016

31

Unusual Lipid A from a Cold-Adapted Bacterium: Detailed Structural Characterization

Casillo, Angela, Ziaco, Marcello, Lindner, Buko, Parrilli, Ermenegilda, Schwudke, Dominik, Holgado, Aurora, Verstrepen, Lynn, Sannino, Filomena, Beyaert, Rudi, Lanzetta, Rosa, Tutino, Maria Luisa, Cor

Journal:

Année:

2017

Fichier:

PDF, 545 KB

2017

32

Lipid metabolic perturbation is an early-onset phenotype in adult spin mutants: a Drosophila model for lysosomal storage disorders

Hebbar, Sarita, Khandelwal, Avinash, R, Jayashree, Hindle, Samantha J., Chiang, Yin Ning, Yew, Joanne Y., Sweeney, Sean T., Schwudke, Dominik, Brill, Julie A

Journal:

Molecular Biology of the Cell

Année:

2017

Langue:

english

Fichier:

PDF, 2.30 MB

english, 2017

33

Inhibition of cytosolic phospholipase A2α impairs an early step of coronavirus replication in cell culture

Müller, Christin, Hardt, Martin, Schwudke, Dominik, Neuman, Benjamin W., Pleschka, Stephan, Ziebuhr, John

Journal:

Journal of Virology

Année:

2017

Langue:

english

Fichier:

PDF, 8.39 MB

english, 2017

34

Lipoteichoic acid deficiency permits normal growth but impairs virulence of Streptococcus pneumoniae

Heß, Nathalie, Waldow, Franziska, Kohler, Thomas P., Rohde, Manfred, Kreikemeyer, Bernd, Gómez-Mejia, Alejandro, Hain, Torsten, Schwudke, Dominik, Vollmer, Waldemar, Hammerschmidt, Sven, Gisch, Nicola

Journal:

Nature Communications

Année:

2017

Langue:

english

Fichier:

PDF, 1.98 MB

english, 2017

35

Software-aided quality control of parallel reaction monitoring based quantitation of lipid mediators

Wutkowski, Adam, Krajewski, Matthias, Bagwan, Navratan, Schäfer, Mathias, Paudyal, Bhesh R., Schaible, Ulrich E., Schwudke, Dominik

Journal:

Analytica Chimica Acta

Année:

2018

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2018

36

Changes in visceral adipose tissue plasma membrane lipid composition in old rats are associated with adipocyte hypertrophy with aging

Bonzón-Kulichenko, Elena, Moltó, Eduardo, Pintado, Cristina, Fernández, Alejandro, Arribas, Carmen, Schwudke, Dominik, Gallardo, Nilda, Shevchenko, Andrej, Andrés, Antonio

Journal:

The Journals of Gerontology Series A Biological Sciences and Medical Sciences

Année:

2018

Langue:

english

Fichier:

PDF, 670 KB

english, 2018

37

Attachment of phosphorylcholine residues to pneumococcal teichoic acids and modification of substitution patterns by the phosphorylcholine esterase

Waldow, Franziska, Kohler, Thomas P., Heß, Nathalie, Schwudke, Dominik, Hammerschmidt, Sven, Gisch, Nicolas

Journal:

Journal of Biological Chemistry

Année:

2018

Langue:

english

Fichier:

PDF, 1022 KB

english, 2018

38

Complex lipid metabolic remodeling is required for efficient hepatitis C virus replication

Hofmann, Sarah, Krajewski, Matthias, Scherer, Christina, Scholz, Verena, Mordhorst, Valerie, Truschow, Pavel, Schöbel, Anja, Reimer, Rudolph, Schwudke, Dominik, Herker, Eva

Journal:

Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids

Année:

2018

Langue:

english

Fichier:

PDF, 20.37 MB

english, 2018

39

Structural analysis and immunostimulatory potency of lipoteichoic acids isolated from three Streptococcus suis serotype 2 strains

Gisch, Nicolas, Auger, Jean-Philippe, Thomsen, Simone, Roy, David, Xu, Jianguo, Schwudke, Dominik, Gottschalk, Marcelo

Journal:

Journal of Biological Chemistry

Année:

2018

Langue:

english

Fichier:

PDF, 1.66 MB

english, 2018

40

The LUX Score: A Metric for Lipidome Homology

Marella, Chakravarthy, Torda, Andrew E., Schwudke, Dominik, Reed, Jennifer L.

Journal:

PLoS Computational Biology

Année:

2015

Langue:

english

Fichier:

PDF, 2.85 MB

english, 2015

41

Top-Down Lipidomics Reveals Ether Lipid Deficiency in Blood Plasma of Hypertensive Patients

Graessler, Juergen, Schwudke, Dominik, Schwarz, Peter E. H., Herzog, Ronny, Shevchenko, Andrej, Bornstein, Stefan R., Calbet, Jose A. L.

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 643 KB

english, 2009

42

LipidXplorer: A Software for Consensual Cross-Platform Lipidomics

Herzog, Ronny, Schuhmann, Kai, Schwudke, Dominik, Sampaio, Julio L., Bornstein, Stefan R., Schroeder, Michael, Shevchenko, Andrej, Brennan, Lorraine

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 545 KB

english, 2012

43

Co-Inactivation of GlnR and CodY Regulators Impacts Pneumococcal Cell Wall Physiology

Johnston, Calum, Bootsma, Hester J., Aldridge, Christine, Manuse, Sylvie, Gisch, Nicolas, Schwudke, Dominik, Hermans, Peter W. M., Grangeasse, Christophe, Polard, Patrice, Vollmer, Waldemar, Claverys,

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 3.64 MB

english, 2015

44

Lipid A structural characterization from the LPS of the Siberian psychro-tolerant Psychrobacter arcticus 273-4 grown at low temperature

Casillo, Angela, Ziaco, Marcello, Lindner, Buko, Parrilli, Ermenegilda, Schwudke, Dominik, Holgado, Aurora, Beyaert, Rudi, Lanzetta, Rosa, Tutino, Maria Luisa, Corsaro, Maria Michela

Journal:

Année:

2018

Fichier:

PDF, 960 KB

2018

45

Lipid A structural characterization from the LPS of the Siberian psychro-tolerant Psychrobacter arcticus 273-4 grown at low temperature

Casillo, Angela, Ziaco, Marcello, Lindner, Buko, Parrilli, Ermenegilda, Schwudke, Dominik, Holgado, Aurora, Beyaert, Rudi, Lanzetta, Rosa, Tutino, Maria Luisa, Corsaro, Maria Michela

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 960 KB

english, 2018

46

Structural Studies of the Lipopolysaccharide from the Fish Pathogen Aeromonas veronii Strain Bs19, Serotype O16

Turska-Szewczuk, Anna, Duda, Katarzyna, Schwudke, Dominik, Pekala, Agnieszka, Kozinska, Alicja, Holst, Otto

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.03 MB

english, 2014

47

PLD3 and spinocerebellar ataxia

Gonzalez, Adriana Carolina, Stroobants, Stijn, Reisdorf, Pia, Gavin, Amanda Lee, Nemazee, David, Schwudke, Dominik, D'Hooge, Rudi, Saftig, Paul, Damme, Markus

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 1.05 MB

english, 2018

48

Inactivation of Bacteria by γ-Irradiation to Investigate the Interaction with Antimicrobial Peptides

Correa, Wilmar, Brandenburg, Julius, Behrends, Jochen, Heinbockel, Lena, Reiling, Norbert, Paulowski, Laura, Schwudke, Dominik, Stephan, Kerstin, Martinez-de-Tejada, Guillermo, Brandenburg, Klaus, Gut

Journal:

Biophysical Journal

Année:

2019

Langue:

english

Fichier:

PDF, 1.47 MB

english, 2019

49

Substrate structure-activity relationship reveals a limited lipopolysaccharide chemotype range for intestinal alkaline phosphatase

Komazin, Gloria, Maybin, Michael, Woodard, Ronald W., Scior, Thomas, Schwudke, Dominik, Schombel, Ursula, Gisch, Nicolas, Mamat, Uwe, Meredith, Timothy C.

Journal:

Journal of Biological Chemistry

Année:

2019

Langue:

english

Fichier:

PDF, 13.83 MB

english, 2019

50

Substrate structure-activity relationship reveals a limited lipopolysaccharide chemotype range for intestinal alkaline phosphatase

Komazin, Gloria, Maybin, Michael, Woodard, Ronald W., Scior, Thomas, Schwudke, Dominik, Schombel, Ursula, Gisch, Nicolas, Mamat, Uwe, Meredith, Timothy C.

Journal:

Journal of Biological Chemistry

Année:

2019

Fichier:

PDF, 13.83 MB

2019